Detailed Description

template<typename ShapeFunction_, int GlobalDim>
class ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >

Definition at line 68 of file TESLocalAssembler.h.

#include <TESLocalAssembler.h>

Inheritance diagram for ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >:

Collaboration diagram for ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >:

Public Types
using	ShapeFunction = ShapeFunction_

using	ShapeMatricesType = ShapeMatrixPolicyType<ShapeFunction, GlobalDim>

using	ShapeMatrices = typename ShapeMatricesType::ShapeMatrices

Public Member Functions
	TESLocalAssembler (MeshLib::Element const &e, std::size_t const local_matrix_size, NumLib::GenericIntegrationMethod const &integration_method, bool const is_axially_symmetric, AssemblyParams const &asm_params)

void	assemble (double const t, double const dt, std::vector< double > const &local_x, std::vector< double > const &local_x_prev, std::vector< double > &local_M_data, std::vector< double > &local_K_data, std::vector< double > &local_b_data) override

Eigen::Map< const Eigen::RowVectorXd >	getShapeMatrix (const unsigned integration_point) const override
	Provides the shape matrix at the given integration point.

bool	checkBounds (std::vector< double > const &local_x, std::vector< double > const &local_x_prev_ts) override

std::vector< double > const &	getIntPtSolidDensity (const double t, std::vector< GlobalVector * > const &x, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_table, std::vector< double > &cache) const override

std::vector< double > const &	getIntPtLoading (const double t, std::vector< GlobalVector * > const &x, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_table, std::vector< double > &cache) const override

std::vector< double > const &	getIntPtReactionDampingFactor (const double t, std::vector< GlobalVector * > const &x, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_table, std::vector< double > &cache) const override

std::vector< double > const &	getIntPtReactionRate (const double t, std::vector< GlobalVector * > const &x, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_table, std::vector< double > &cache) const override

std::vector< double > const &	getIntPtDarcyVelocity (const double t, std::vector< GlobalVector * > const &x, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_table, std::vector< double > &cache) const override

Public Member Functions inherited from ProcessLib::TES::TESLocalAssemblerInterface
	~TESLocalAssemblerInterface () override=default

Public Member Functions inherited from ProcessLib::LocalAssemblerInterface
virtual	~LocalAssemblerInterface ()=default

virtual void	setInitialConditions (std::size_t const mesh_item_id, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_tables, std::vector< GlobalVector * > const &x, double const t, int const process_id)

virtual void	initialize (std::size_t const mesh_item_id, NumLib::LocalToGlobalIndexMap const &dof_table)

virtual void	preAssemble (double const, double const, std::vector< double > const &)

virtual void	assembleForStaggeredScheme (double const t, double const dt, Eigen::VectorXd const &local_x, Eigen::VectorXd const &local_x_prev, int const process_id, std::vector< double > &local_M_data, std::vector< double > &local_K_data, std::vector< double > &local_b_data)

virtual void	assembleWithJacobian (double const t, double const dt, std::vector< double > const &local_x, std::vector< double > const &local_x_prev, std::vector< double > &local_M_data, std::vector< double > &local_K_data, std::vector< double > &local_b_data, std::vector< double > &local_Jac_data)

virtual void	assembleWithJacobianForStaggeredScheme (double const t, double const dt, Eigen::VectorXd const &local_x, Eigen::VectorXd const &local_x_prev, int const process_id, std::vector< double > &local_M_data, std::vector< double > &local_K_data, std::vector< double > &local_b_data, std::vector< double > &local_Jac_data)

virtual void	computeSecondaryVariable (std::size_t const mesh_item_id, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_tables, double const t, double const dt, std::vector< GlobalVector * > const &x, GlobalVector const &x_prev, int const process_id)

virtual void	preTimestep (std::size_t const mesh_item_id, NumLib::LocalToGlobalIndexMap const &dof_table, GlobalVector const &x, double const t, double const delta_t)

virtual void	postTimestep (std::size_t const mesh_item_id, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_tables, std::vector< GlobalVector * > const &x, std::vector< GlobalVector * > const &x_prev, double const t, double const dt, int const process_id)

void	postNonLinearSolver (std::size_t const mesh_item_id, std::vector< NumLib::LocalToGlobalIndexMap const * > const &dof_tables, std::vector< GlobalVector * > const &x, std::vector< GlobalVector * > const &x_prev, double const t, double const dt, int const process_id)

virtual Eigen::Vector3d	getFlux (MathLib::Point3d const &, double const, std::vector< double > const &) const

virtual Eigen::Vector3d	getFlux (MathLib::Point3d const &, double const, std::vector< std::vector< double > > const &) const
	Fits to staggered scheme.

Public Member Functions inherited from NumLib::ExtrapolatableElement
virtual	~ExtrapolatableElement ()=default

Private Types
using	LAT

using	NodalMatrixType = typename LAT::LocalMatrix

using	NodalVectorType = typename LAT::LocalVector

Private Attributes
MeshLib::Element const &	_element

NumLib::GenericIntegrationMethod const &	_integration_method

std::vector< ShapeMatrices, Eigen::aligned_allocator< ShapeMatrices > >	_shape_matrices

TESLocalAssemblerInner< LAT >	_d

Member Typedef Documentation

◆ LAT

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::LAT

private

Initial value:

LocalAssemblerTraits<ShapeMatricesType, ShapeFunction::NPOINTS,

NODAL_DOF, GlobalDim>

ProcessLib::TES::TESLocalAssembler::ShapeMatricesType

ShapeMatrixPolicyType< ShapeFunction, GlobalDim > ShapeMatricesType

Definition TESLocalAssembler.h:72

ProcessLib::TES::NODAL_DOF

const unsigned NODAL_DOF

Definition TESAssemblyParams.h:24

ProcessLib::LocalAssemblerTraits

detail::LocalAssemblerTraitsFixed< ShpPol, NNodes, NodalDOF, Dim > LocalAssemblerTraits

Definition LocalAssemblerTraits.h:185

Definition at line 139 of file TESLocalAssembler.h.

◆ NodalMatrixType

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::NodalMatrixType = typename LAT::LocalMatrix

private

Definition at line 144 of file TESLocalAssembler.h.

◆ NodalVectorType

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::NodalVectorType = typename LAT::LocalVector

private

Definition at line 145 of file TESLocalAssembler.h.

◆ ShapeFunction

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::ShapeFunction = ShapeFunction_

Definition at line 71 of file TESLocalAssembler.h.

◆ ShapeMatrices

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::ShapeMatrices = typename ShapeMatricesType::ShapeMatrices

Definition at line 73 of file TESLocalAssembler.h.

◆ ShapeMatricesType

template<typename ShapeFunction_ , int GlobalDim>

using ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::ShapeMatricesType = ShapeMatrixPolicyType<ShapeFunction, GlobalDim>

Definition at line 72 of file TESLocalAssembler.h.

Constructor & Destructor Documentation

◆ TESLocalAssembler()

template<typename ShapeFunction_ , int GlobalDim>

ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::TESLocalAssembler	(	MeshLib::Element const &	e,
		std::size_t const	local_matrix_size,
		NumLib::GenericIntegrationMethod const &	integration_method,
		bool const	is_axially_symmetric,
		AssemblyParams const &	asm_params )

Definition at line 119 of file TESLocalAssembler-impl.h.

    : _element(e),
      _integration_method(integration_method),
      _shape_matrices(NumLib::initShapeMatrices<ShapeFunction,
                                                ShapeMatricesType, GlobalDim>(
          e, is_axially_symmetric, _integration_method)),
      _d(asm_params, _integration_method.getNumberOfPoints(), GlobalDim)
{
}

Member Function Documentation

◆ assemble()

template<typename ShapeFunction_ , int GlobalDim>

void ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::assemble	(	double const	t,
		double const	dt,
		std::vector< double > const &	local_x,
		std::vector< double > const &	local_x_prev,
		std::vector< double > &	local_M_data,
		std::vector< double > &	local_K_data,
		std::vector< double > &	local_b_data )

overridevirtual

Reimplemented from ProcessLib::LocalAssemblerInterface.

Definition at line 135 of file TESLocalAssembler-impl.h.

{
    auto const local_matrix_size = local_x.size();
    // This assertion is valid only if all nodal d.o.f. use the same shape
    // matrices.
    assert(local_matrix_size == ShapeFunction::NPOINTS * NODAL_DOF);
 
    auto local_M = MathLib::createZeroedMatrix<NodalMatrixType>(
        local_M_data, local_matrix_size, local_matrix_size);
    auto local_K = MathLib::createZeroedMatrix<NodalMatrixType>(
        local_K_data, local_matrix_size, local_matrix_size);
    auto local_b = MathLib::createZeroedVector<NodalVectorType>(
        local_b_data, local_matrix_size);
 
    unsigned const n_integration_points =
        _integration_method.getNumberOfPoints();
 
    _d.preEachAssemble();
 
    for (unsigned ip = 0; ip < n_integration_points; ip++)
    {
        auto const& sm = _shape_matrices[ip];
        auto const& wp = _integration_method.getWeightedPoint(ip);
        auto const weight = wp.getWeight();
 
        _d.assembleIntegrationPoint(ip, local_x, sm, weight, local_M, local_K,
                                    local_b);
    }
 
    if (_d.getAssemblyParameters().output_element_matrices)
    {
        std::puts("### Element: ?");
 
        std::puts("---Velocity of water");
        for (auto const& vs : _d.getData().velocity)
        {
            std::printf("| ");
            for (auto v : vs)
            {
                std::printf("%23.16e ", v);
            }
            std::printf("|\n");
        }
 
        std::printf("\n---Mass matrix: \n");
        ogs5OutMat(local_M);
        std::printf("\n");
 
        std::printf("---Laplacian + Advective + Content matrix: \n");
        ogs5OutMat(local_K);
        std::printf("\n");
 
        std::printf("---RHS: \n");
        ogs5OutVec(local_b);
        std::printf("\n");
    }
}

References ProcessLib::TES::NODAL_DOF.

◆ checkBounds()

template<typename ShapeFunction_ , int GlobalDim>

bool ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::checkBounds	(	std::vector< double > const &	local_x,
		std::vector< double > const &	local_x_prev_ts )

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 299 of file TESLocalAssembler-impl.h.

{
    return _d.getReactionAdaptor().checkBounds(local_x, local_x_prev_ts);
}

◆ getIntPtDarcyVelocity()

template<typename ShapeFunction_ , int GlobalDim>

std::vector< double > const & ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getIntPtDarcyVelocity	(	const double	t,
		std::vector< GlobalVector * > const &	x,
		std::vector< NumLib::LocalToGlobalIndexMap const * > const &	dof_table,
		std::vector< double > &	cache ) const

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 257 of file TESLocalAssembler-impl.h.

{
    auto const n_integration_points = _integration_method.getNumberOfPoints();
 
    constexpr int process_id = 0;  // monolithic scheme
    auto const indices =
        NumLib::getIndices(_element.getID(), *dof_table[process_id]);
    assert(!indices.empty());
    auto const local_x = x[process_id]->get(indices);
    // local_x is ordered by component, local_x_mat is row major
    auto const local_x_mat = MathLib::toMatrix<
        Eigen::Matrix<double, NODAL_DOF, Eigen::Dynamic, Eigen::RowMajor>>(
        local_x, NODAL_DOF, ShapeFunction_::NPOINTS);
 
    cache.clear();
    auto cache_mat = MathLib::createZeroedMatrix<
        Eigen::Matrix<double, GlobalDim, Eigen::Dynamic, Eigen::RowMajor>>(
        cache, GlobalDim, n_integration_points);
 
    for (unsigned i = 0; i < n_integration_points; ++i)
    {
        double p, T, x;
        NumLib::shapeFunctionInterpolate(local_x, _shape_matrices[i].N, p, T,
                                         x);
        const double eta_GR = fluid_viscosity(p, T, x);
 
        auto const& k = _d.getAssemblyParameters().solid_perm_tensor;
        cache_mat.col(i).noalias() =
            k *
            (_shape_matrices[i].dNdx *
             local_x_mat.row(COMPONENT_ID_PRESSURE).transpose()) /
            -eta_GR;
    }
 
    return cache;
}

References ProcessLib::TES::COMPONENT_ID_PRESSURE, MathLib::createZeroedMatrix(), ProcessLib::TES::fluid_viscosity(), NumLib::getIndices(), ProcessLib::TES::NODAL_DOF, NumLib::detail::shapeFunctionInterpolate(), and MathLib::toMatrix().

◆ getIntPtLoading()

template<typename ShapeFunction_ , int GlobalDim>

std::vector< double > const & ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getIntPtLoading	(	const double	t,
		std::vector< GlobalVector * > const &	x,
		std::vector< NumLib::LocalToGlobalIndexMap const * > const &	dof_table,
		std::vector< double > &	cache ) const

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 210 of file TESLocalAssembler-impl.h.

{
    auto const rho_SR = _d.getData().solid_density;
    auto const rho_SR_dry = _d.getAssemblyParameters().rho_SR_dry;
 
    cache.clear();
    cache.reserve(rho_SR.size());
 
    transform(cbegin(rho_SR), cend(rho_SR), back_inserter(cache),
              [&](auto const rho) { return rho / rho_SR_dry - 1.0; });
 
    return cache;
}

◆ getIntPtReactionDampingFactor()

template<typename ShapeFunction_ , int GlobalDim>

std::vector< double > const & ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getIntPtReactionDampingFactor	(	const double	t,
		std::vector< GlobalVector * > const &	x,
		std::vector< NumLib::LocalToGlobalIndexMap const * > const &	dof_table,
		std::vector< double > &	cache ) const

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 230 of file TESLocalAssembler-impl.h.

{
    auto const fac = _d.getData().reaction_adaptor->getReactionDampingFactor();
    auto const num_integration_points = _d.getData().solid_density.size();
 
    cache.clear();
    cache.resize(num_integration_points, fac);
 
    return cache;
}

◆ getIntPtReactionRate()

template<typename ShapeFunction_ , int GlobalDim>

std::vector< double > const & ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getIntPtReactionRate	(	const double	t,
		std::vector< GlobalVector * > const &	x,
		std::vector< NumLib::LocalToGlobalIndexMap const * > const &	dof_table,
		std::vector< double > &	cache ) const

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 246 of file TESLocalAssembler-impl.h.

{
    return _d.getData().reaction_rate;
}

◆ getIntPtSolidDensity()

template<typename ShapeFunction_ , int GlobalDim>

std::vector< double > const & ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getIntPtSolidDensity	(	const double	t,
		std::vector< GlobalVector * > const &	x,
		std::vector< NumLib::LocalToGlobalIndexMap const * > const &	dof_table,
		std::vector< double > &	cache ) const

overridevirtual

Implements ProcessLib::TES::TESLocalAssemblerInterface.

Definition at line 199 of file TESLocalAssembler-impl.h.

{
    return _d.getData().solid_density;
}

◆ getShapeMatrix()

template<typename ShapeFunction_ , int GlobalDim>

Eigen::Map< const Eigen::RowVectorXd > ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getShapeMatrix ( const unsigned integration_point ) const

inlineoverridevirtual

Provides the shape matrix at the given integration point.

Implements NumLib::ExtrapolatableElement.

Definition at line 89 of file TESLocalAssembler.h.

    {
        auto const& N = _shape_matrices[integration_point].N;
 
        // assumes N is stored contiguously in memory
        return Eigen::Map<const Eigen::RowVectorXd>(N.data(), N.size());
    }

References ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::_shape_matrices.

Member Data Documentation

◆ _d

template<typename ShapeFunction_ , int GlobalDim>

TESLocalAssemblerInner<LAT> ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::_d

private

Definition at line 142 of file TESLocalAssembler.h.

◆ _element

template<typename ShapeFunction_ , int GlobalDim>

MeshLib::Element const& ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::_element

private

Definition at line 132 of file TESLocalAssembler.h.

◆ _integration_method

template<typename ShapeFunction_ , int GlobalDim>

NumLib::GenericIntegrationMethod const& ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::_integration_method

private

Definition at line 134 of file TESLocalAssembler.h.

◆ _shape_matrices

template<typename ShapeFunction_ , int GlobalDim>

std::vector<ShapeMatrices, Eigen::aligned_allocator<ShapeMatrices> > ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::_shape_matrices

private

Definition at line 137 of file TESLocalAssembler.h.

Referenced by ProcessLib::TES::TESLocalAssembler< ShapeFunction_, GlobalDim >::getShapeMatrix().

The documentation for this class was generated from the following files:

ProcessLib/TES/TESLocalAssembler.h
ProcessLib/TES/TESLocalAssembler-impl.h

Detailed Description

Public Types

Public Member Functions

Private Types

Private Attributes

Member Typedef Documentation

◆ LAT

◆ NodalMatrixType

◆ NodalVectorType

◆ ShapeFunction

◆ ShapeMatrices

◆ ShapeMatricesType

Constructor & Destructor Documentation

◆ TESLocalAssembler()

Member Function Documentation

◆ assemble()

◆ checkBounds()

◆ getIntPtDarcyVelocity()

◆ getIntPtLoading()

◆ getIntPtReactionDampingFactor()

◆ getIntPtReactionRate()

◆ getIntPtSolidDensity()

◆ getShapeMatrix()

Member Data Documentation

◆ _d

◆ _element

◆ _integration_method

◆ _shape_matrices