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OGS
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OGS
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<OpenGeoSysProject>
<meshes>
<mesh axially_symmetric="false">meshes/column.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_zmin.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_xmin.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_xmax.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_ymin.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_ymax.vtu</mesh>
<mesh axially_symmetric="false">meshes/column_zmax.vtu</mesh>
</meshes>
<processes>
<process>
<name>TRM</name>
<type>THERMO_RICHARDS_MECHANICS</type>
<subtype>StressSaturation_StrainPressureTemperature</subtype>
<integration_order>4</integration_order>
<constitutive_relation>
<type>MFront</type>
<behaviour>BentoniteBehaviour</behaviour>
<library path_is_relative_to_prj_file="false">libOgsMFrontBehaviourBentoniteGeneralModForCTestsOnly</library>
<initial_values>
<state_variable name="e" parameter="e0" />
<state_variable name="em" parameter="em0" />
<state_variable name="eM" parameter="eM0" />
<state_variable name="SrM" parameter="SrM0" />
<state_variable name="a_scan" parameter="a_scan0" />
<state_variable name="re" parameter="re0" />
</initial_values>
</constitutive_relation>
<process_variables>
<temperature>temperature</temperature>
<pressure>pressure</pressure>
<displacement>displacement</displacement>
</process_variables>
<secondary_variables>
<secondary_variable internal_name="sigma_total" output_name="sigma_total" />
<secondary_variable internal_name="epsilon" output_name="epsilon" />
<secondary_variable internal_name="saturation" output_name="saturation" />
<secondary_variable internal_name="porosity" output_name="porosity" />
<secondary_variable internal_name="e" output_name="e" />
<secondary_variable internal_name="em" output_name="em" />
<secondary_variable internal_name="eM" output_name="eM" />
<secondary_variable internal_name="SrM" output_name="SrM" />
<secondary_variable internal_name="a_scan" output_name="a_scan" />
<secondary_variable internal_name="re" output_name="re" />
</secondary_variables>
<specific_body_force>0 0 0</specific_body_force>
<initial_stress type="total">initial_stress</initial_stress>
</process>
</processes>
<media>
<medium>
<phases>
<phase>
<type>AqueousLiquid</type>
<properties>
<property>
<name>specific_heat_capacity</name>
<type>Constant</type>
<value>4181.3</value>
</property>
<property>
<name>thermal_conductivity</name>
<type>Constant</type>
<value>0.58</value>
</property>
<property>
<name>density</name>
<type>Constant</type>
<value>1000</value>
</property>
<property>
<name>thermal_expansivity</name>
<type>Constant</type>
<value>4e-4</value>
</property>
<property>
<name>viscosity</name>
<type>Constant</type>
<value>1.8e-3</value>
</property>
</properties>
</phase>
<phase>
<type>Solid</type>
<properties>
<property>
<name>density</name>
<type>Constant</type>
<value>2758.0</value>
</property>
<property>
<name>thermal_conductivity</name>
<type>Constant</type>
<value>1.06</value>
</property>
<property>
<name>specific_heat_capacity</name>
<type>Constant</type>
<value>880.0</value>
</property>
<property>
<name>thermal_expansivity</name>
<type>Constant</type>
<value>3e-4</value>
</property>
</properties>
</phase>
</phases>
<properties>
<property>
<name>saturation</name>
<type>Constant</type>
<value>0.345</value>
</property>
<property>
<name>relative_permeability</name>
<type>Constant</type>
<value>1</value>
</property>
<property>
<name>permeability</name>
<type>Constant</type>
<value>3e-20</value>
</property>
<property>
<name>porosity</name>
<type>PorosityFromMassBalance</type>
<initial_porosity>phi0</initial_porosity>
<minimal_porosity>0</minimal_porosity>
<maximal_porosity>1</maximal_porosity>
</property>
<property>
<name>bishops_effective_stress</name>
<type>BishopsPowerLaw</type>
<exponent>1.0</exponent>
</property>
<property>
<name>biot_coefficient</name>
<type>Constant</type>
<value>1.0</value>
</property>
<property>
<name>thermal_conductivity</name>
<type>EffectiveThermalConductivityPorosityMixing</type>
</property>
</properties>
</medium>
</media>
<parameters>
<parameter>
<mesh>column</mesh>
<name>initial_stress</name>
<type>Function</type>
<expression>-2000000</expression>
<expression>-2000000</expression>
<expression>-2000000</expression>
<expression>0</expression>
<expression>0</expression>
<expression>0</expression>
</parameter>
<parameter>
<name>e0</name>
<type>Constant</type>
<value>0.67545</value>
</parameter>
<parameter>
<name>em0</name>
<type>Constant</type>
<value>0.0</value>
</parameter>
<parameter>
<name>eM0</name>
<type>Constant</type>
<value>0.0</value>
</parameter>
<parameter>
<name>SrM0</name>
<type>Constant</type>
<value>0.0</value>
</parameter>
<parameter>
<name>a_scan0</name>
<type>Constant</type>
<value>0.0</value>
</parameter>
<parameter>
<name>re0</name>
<type>Constant</type>
<value>0.0</value>
</parameter>
<parameter>
<name>phi0</name>
<type>Constant</type>
<value>0.403145</value>
</parameter>
<parameter>
<name>temperature_IC</name>
<type>Constant</type>
<value>298.15</value>
</parameter>
<parameter>
<name>pressure_IC</name>
<type>Constant</type>
<values>-100.e6</values>
</parameter>
<parameter>
<name>displacement_IC</name>
<type>Constant</type>
<values>0 0 0</values>
</parameter>
<parameter>
<name>temperature_BC</name>
<type>Constant</type>
<value>298.15</value>
</parameter>
<parameter>
<name>pressure_BC_bot</name>
<type>Constant</type>
<value>-100.e6</value>
</parameter>
<parameter>
<name>pressure_BC_top</name>
<type>Function</type>
<expression>if (t <=3600, -100.e6*(1-t/3600), 0)</expression>
</parameter>
<parameter>
<name>displacement_BC_diriH</name>
<type>Constant</type>
<value>0</value>
</parameter>
</parameters>
<process_variables>
<process_variable>
<name>temperature</name>
<components>1</components>
<order>1</order>
<initial_condition>temperature_IC</initial_condition>
<boundary_conditions>
<boundary_condition>
<mesh>column</mesh>
<type>Dirichlet</type>
<parameter>temperature_BC</parameter>
</boundary_condition>
</boundary_conditions>
</process_variable>
<process_variable>
<name>pressure</name>
<components>1</components>
<order>1</order>
<initial_condition>pressure_IC</initial_condition>
<boundary_conditions>
<boundary_condition>
<mesh>column_zmax</mesh>
<type>Dirichlet</type>
<parameter>pressure_BC_top</parameter>
</boundary_condition>
</boundary_conditions>
</process_variable>
<process_variable>
<name>displacement</name>
<components>3</components>
<order>2</order>
<initial_condition>displacement_IC</initial_condition>
<boundary_conditions>
<boundary_condition>
<mesh>column_xmin</mesh>
<type>Dirichlet</type>
<component>0</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
<boundary_condition>
<mesh>column_xmax</mesh>
<type>Dirichlet</type>
<component>0</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
<boundary_condition>
<mesh>column_ymin</mesh>
<type>Dirichlet</type>
<component>1</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
<boundary_condition>
<mesh>column_ymax</mesh>
<type>Dirichlet</type>
<component>1</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
<boundary_condition>
<mesh>column_zmin</mesh>
<type>Dirichlet</type>
<component>2</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
<boundary_condition>
<mesh>column_zmax</mesh>
<type>Dirichlet</type>
<component>2</component>
<parameter>displacement_BC_diriH</parameter>
</boundary_condition>
</boundary_conditions>
</process_variable>
</process_variables>
<time_loop>
<processes>
<process ref="TRM">
<nonlinear_solver>basic_newton</nonlinear_solver>
<convergence_criterion>
<type>PerComponentDeltaX</type>
<norm_type>NORM2</norm_type>
<reltols>1e0 1e-2 1e-2 1e-2 1e-2</reltols>
</convergence_criterion>
<time_discretization>
<type>BackwardEuler</type>
</time_discretization>
<time_stepping>
<type>IterationNumberBasedTimeStepping</type>
<t_initial>0</t_initial>
<t_end>360000</t_end>
<initial_dt>1e-2</initial_dt>
<minimum_dt>1e-4</minimum_dt>
<maximum_dt>3600</maximum_dt>
<number_iterations>4 9 11</number_iterations>
<multiplier>2.0 1.0 0.5</multiplier>
</time_stepping>
</process>
</processes>
<output>
<type>VTK</type>
<prefix>bentonite_column</prefix>
<timesteps>
<pair>
<repeat>1</repeat>
<each_steps>1</each_steps>
</pair>
</timesteps>
<variables />
<suffix>ts{:timestep}_t_{:gtime}_sec</suffix>
</output>
</time_loop>
<nonlinear_solvers>
<nonlinear_solver>
<name>basic_newton</name>
<type>Newton</type>
<max_iter>50</max_iter>
<linear_solver>general_linear_solver</linear_solver>
</nonlinear_solver>
</nonlinear_solvers>
<linear_solvers>
<linear_solver>
<name>general_linear_solver</name>
<eigen>
<solver_type>BiCGSTAB</solver_type>
<precon_type>DIAGONAL</precon_type>
<max_iteration_step>10000</max_iteration_step>
<error_tolerance>1e-16</error_tolerance>
<scaling>1</scaling>
</eigen>
<petsc>
<parameters>-ksp_type bcgs -pc_type jacobi -ksp_rtol 1.e-14 -ksp_atol 1.e-14 -ksp_max_it 4000</parameters>
</petsc>
</linear_solver>
</linear_solvers>
<test_definition>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>HeatFlowRate</field>
<absolute_tolerance>2.2e-16</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>MassFlowRate</field>
<absolute_tolerance>2.8e-23</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>NodalForces</field>
<absolute_tolerance>2.0e-13</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>SrM</field>
<absolute_tolerance>4.9e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>a_scan</field>
<absolute_tolerance>3.8e-13</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>displacement</field>
<absolute_tolerance>1e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>dry_density_solid_ip</field>
<absolute_tolerance>5.7e-12</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>e</field>
<absolute_tolerance>6.7e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>eM</field>
<absolute_tolerance>1.4e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>em</field>
<absolute_tolerance>1.3e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>epsilon</field>
<absolute_tolerance>2.9e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>epsilon_ip</field>
<absolute_tolerance>2.8e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>intrinsic_permeability_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>liquid_density_avg</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>liquid_density_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_RungeKutta_InternalStateVariables[0]_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_RungeKutta_InternalStateVariables[1]_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_RungeKutta_InternalStateVariables[2]_ip</field>
<absolute_tolerance>6.2e-12</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_RungeKutta_InternalStateVariables[3]_ip</field>
<absolute_tolerance>1.4e-10</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_SrM_ip</field>
<absolute_tolerance>5.4e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_a_scan_ip</field>
<absolute_tolerance>4.3e-13</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_eM_ip</field>
<absolute_tolerance>1.4e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_e_ip</field>
<absolute_tolerance>6.8e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_em_ip</field>
<absolute_tolerance>1.2e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>material_state_variable_re_ip</field>
<absolute_tolerance>1.7e-13</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>porosity</field>
<absolute_tolerance>2.8e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>porosity_avg</field>
<absolute_tolerance>2.2e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>porosity_ip</field>
<absolute_tolerance>2.2e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>pressure</field>
<absolute_tolerance>7e-06</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>pressure_interpolated</field>
<absolute_tolerance>7e-06</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>re</field>
<absolute_tolerance>1.9e-13</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>relative_permeability_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>saturation</field>
<absolute_tolerance>2.5e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>saturation_avg</field>
<absolute_tolerance>8e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>saturation_ip</field>
<absolute_tolerance>2.8e-14</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>sigma_total</field>
<absolute_tolerance>4.4e-07</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>sigma_total_avg</field>
<absolute_tolerance>1.6e-07</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>sigma_total_ip</field>
<absolute_tolerance>4.5e-07</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>temperature</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>temperature_interpolated</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>transport_porosity_ip</field>
<absolute_tolerance>2.2e-15</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>velocity_ip</field>
<absolute_tolerance>8.8e-20</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>viscosity_avg</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
<vtkdiff>
<regex>bentonite_column_ts_.*_t_.*_sec[.]vtu</regex>
<field>viscosity_ip</field>
<absolute_tolerance>0.0</absolute_tolerance>
<relative_tolerance>0.0</relative_tolerance>
</vtkdiff>
</test_definition>
</OpenGeoSysProject>
1.12.0