17#include <pybind11/eval.h>
20#include <boost/algorithm/string/predicate.hpp>
22#include <range/v3/action/sort.hpp>
23#include <range/v3/action/unique.hpp>
24#include <range/v3/algorithm/contains.hpp>
25#include <range/v3/range/conversion.hpp>
37#include "InfoLib/CMakeInfo.h"
42#elif defined(USE_PETSC)
65#ifdef OGS_EMBED_PYTHON_INTERPRETER
69#ifdef OGS_BUILD_PROCESS_COMPONENTTRANSPORT
73#ifdef OGS_BUILD_PROCESS_STEADYSTATEDIFFUSION
76#ifdef OGS_BUILD_PROCESS_HT
79#ifdef OGS_BUILD_PROCESS_HEATCONDUCTION
82#ifdef OGS_BUILD_PROCESS_HEATTRANSPORTBHE
85#ifdef OGS_BUILD_PROCESS_HYDROMECHANICS
88#ifdef OGS_BUILD_PROCESS_LARGEDEFORMATION
91#ifdef OGS_BUILD_PROCESS_LIE
95#ifdef OGS_BUILD_PROCESS_LIQUIDFLOW
98#ifdef OGS_BUILD_PROCESS_STOKESFLOW
102#ifdef OGS_BUILD_PROCESS_THERMORICHARDSMECHANICS
106#ifdef OGS_BUILD_PROCESS_PHASEFIELD
109#ifdef OGS_BUILD_PROCESS_RICHARDSCOMPONENTTRANSPORT
112#ifdef OGS_BUILD_PROCESS_RICHARDSFLOW
115#ifdef OGS_BUILD_PROCESS_RICHARDSMECHANICS
118#ifdef OGS_BUILD_PROCESS_SMALLDEFORMATION
121#ifdef OGS_BUILD_PROCESS_SMALLDEFORMATIONNONLOCAL
124#ifdef OGS_BUILD_PROCESS_TES
127#ifdef OGS_BUILD_PROCESS_TH2M
130#ifdef OGS_BUILD_PROCESS_THERMALTWOPHASEFLOWWITHPP
133#ifdef OGS_BUILD_PROCESS_THERMOHYDROMECHANICS
136#ifdef OGS_BUILD_PROCESS_THERMOMECHANICALPHASEFIELD
139#ifdef OGS_BUILD_PROCESS_THERMOMECHANICS
142#ifdef OGS_BUILD_PROCESS_THERMORICHARDSFLOW
145#ifdef OGS_BUILD_PROCESS_TWOPHASEFLOWWITHPP
148#ifdef OGS_BUILD_PROCESS_TWOPHASEFLOWWITHPRHO
156 DBUG(
"Reading geometry file '{:s}'.", fname);
163 std::string
const& directory)
166 mesh_config_parameter.
getValue<std::string>(), directory);
167 DBUG(
"Reading mesh file '{:s}'.", mesh_file);
169 auto mesh = std::unique_ptr<MeshLib::Mesh>(
173 OGS_FATAL(
"Could not read mesh from '{:s}' file. No mesh added.",
177#ifdef DOXYGEN_DOCU_ONLY
182 if (
auto const axially_symmetric =
185 "axially_symmetric"))
187 mesh->setAxiallySymmetric(*axially_symmetric);
196 std::vector<std::unique_ptr<MeshLib::Mesh>> meshes;
204 DBUG(
"Reading multiple meshes.");
206 auto const configs = optional_meshes->getConfigParameterList(
"mesh");
207 std::transform(configs.begin(), configs.end(),
208 std::back_inserter(meshes),
209 [&directory](
auto const& mesh_config)
210 { return readSingleMesh(mesh_config, directory); });
211 if (
auto const geometry_file_name =
215 std::string
const geometry_file =
234 std::unique_ptr<MeshGeoToolsLib::SearchLength> search_length_algorithm =
236 bool const multiple_nodes_allowed =
false;
237 auto additional_meshes =
239 geoObjects, *meshes[0], std::move(search_length_algorithm),
240 multiple_nodes_allowed);
242 std::move(begin(additional_meshes), end(additional_meshes),
243 std::back_inserter(meshes));
247 ranges::actions::sort;
248 auto const sorted_names = meshes | mesh_names;
249 auto const unique_names = meshes | mesh_names | ranges::actions::unique;
250 if (unique_names.size() < sorted_names.size())
253 "Mesh names aren't unique. From project file read mesh names are:");
260 auto const zero_mesh_field_data_by_material_ids =
263 "zero_mesh_field_data_by_material_ids");
264 if (zero_mesh_field_data_by_material_ids)
267 "Tag 'zero_mesh_field_data_by_material_ids` is experimental. Its "
268 "name may be changed, or it may be removed due to its "
269 "corresponding feature becomes a single tool. Please use it with "
272 *meshes[0], *zero_mesh_field_data_by_material_ids);
284 INFO(
"readRasters ... ");
285 std::vector<GeoLib::NamedRaster> named_rasters;
289 if (optional_rasters)
291 INFO(
"Reading rasters.");
293 auto const configs = optional_rasters->getConfigSubtreeList(
"raster");
295 configs.begin(), configs.end(), std::back_inserter(named_rasters),
296 [&raster_directory, &min_max_points](
auto const& raster_config)
298 return GeoLib::IO::readRaster(raster_config, raster_directory,
302 INFO(
"readRasters done");
303 return named_rasters;
327 std::optional<BaseLib::ConfigTree>
const& config,
328 std::vector<std::unique_ptr<ParameterLib::ParameterBase>>
const& parameters)
335 DBUG(
"Reading coordinate system configuration.");
340 auto const& basis_vector_0 = ParameterLib::findParameter<double>(
343 "basis_vector_0", parameters, 0 );
344 int const dimension = basis_vector_0.getNumberOfGlobalComponents();
347 if (dimension != 2 && dimension != 3)
350 "Basis vector parameter '{:s}' must have two or three components, "
352 basis_vector_0.name, dimension);
359 auto const& basis_vector_1 = ParameterLib::findParameter<double>(
362 "basis_vector_1", parameters, dimension);
375 auto const& basis_vector_2 = ParameterLib::findParameter<double>(
378 "basis_vector_2", parameters, dimension);
387 std::string
const& project_directory,
388 std::string
const& output_directory,
389 std::string
const& mesh_directory,
390 [[maybe_unused]] std::string
const& script_directory)
391 : _mesh_vec(
readMeshes(project_config, mesh_directory)),
392 _named_rasters(
readRasters(project_config, project_directory,
399 if (
auto const python_script =
403 namespace py = pybind11;
405#ifdef OGS_EMBED_PYTHON_INTERPRETER
410 auto py_path = py::module::import(
"sys").attr(
"path");
411 py_path.attr(
"append")(script_directory);
413 py_path.attr(
"append")(
414 CMakeInfoLib::CMakeInfo::python_virtualenv_sitepackages);
416 auto const script_path =
420 py::object scope = py::module::import(
"__main__").attr(
"__dict__");
422 auto globals = py::dict(scope);
423 globals[
"ogs_prj_directory"] = project_directory;
424 globals[
"ogs_mesh_directory"] = mesh_directory;
425 globals[
"ogs_script_directory"] = script_directory;
426 py::eval_file(script_path, scope);
432 auto parameter_names_for_transformation =
443 if (std::find(begin(parameter_names_for_transformation),
444 end(parameter_names_for_transformation),
446 end(parameter_names_for_transformation))
451 "The parameter '{:s}' is using the local coordinate system "
452 "but no local coordinate system was provided.",
477 project_directory, output_directory,
478 std::move(chemical_solver_interface));
491 DBUG(
"Parse process variables:");
493 std::set<std::string> names;
501 auto const mesh_name =
503 var_config.getConfigParameter<std::string>(
"mesh",
508 [&mesh_name](
auto const& m) {
return m->getName() == mesh_name; },
509 "Expected to find a mesh named " + mesh_name +
".");
513 if (!names.insert(pv.getName()).second)
515 OGS_FATAL(
"A process variable with name `{:s}' already exists.",
528 std::set<std::string> names;
529 std::vector<std::string> parameter_names_for_transformation;
531 DBUG(
"Reading parameters:");
532 for (
auto parameter_config :
538 if (!names.insert(p->name).second)
540 OGS_FATAL(
"A parameter with name `{:s}' already exists.", p->name);
543 auto const use_local_coordinate_system =
545 parameter_config.getConfigParameterOptional<
bool>(
546 "use_local_coordinate_system");
547 if (!!use_local_coordinate_system && *use_local_coordinate_system)
549 parameter_names_for_transformation.push_back(p->name);
562 return parameter_names_for_transformation;
566 std::optional<BaseLib::ConfigTree>
const& media_config)
573 DBUG(
"Reading media:");
577 ERR(
"A mesh is required to define medium materials.");
581 for (
auto const& medium_config :
583 media_config->getConfigSubtreeList(
"medium"))
585 auto material_id_string =
587 medium_config.getConfigAttribute<std::string>(
"id",
"0");
589 auto const material_ids_of_this_medium =
592 for (
auto const&
id : material_ids_of_this_medium)
597 "Multiple media were specified for the same material id "
598 "'{:d}'. Keep in mind, that if no material id is "
599 "specified, it is assumed to be 0 by default.",
603 if (
id == material_ids_of_this_medium[0])
606 id,
_mesh_vec[0]->getDimension(), medium_config,
624 OGS_FATAL(
"No entity is found inside <media>.");
628std::unique_ptr<ChemistryLib::ChemicalSolverInterface>
630 std::optional<BaseLib::ConfigTree>
const& config,
631 std::string
const& output_directory)
638 std::unique_ptr<ChemistryLib::ChemicalSolverInterface>
639 chemical_solver_interface;
640#ifdef OGS_BUILD_PROCESS_COMPONENTTRANSPORT
642 "Ready for initializing interface to a chemical solver for water "
643 "chemistry calculation.");
645 auto const chemical_solver =
647 config->getConfigAttribute<std::string>(
"chemical_solver");
649 if (boost::iequals(chemical_solver,
"Phreeqc"))
652 "Configuring phreeqc interface for water chemistry calculation "
653 "using file-based approach.");
657 *config, output_directory);
659 else if (boost::iequals(chemical_solver,
"PhreeqcKernel"))
662 "The chemical solver option of PhreeqcKernel is not accessible for "
663 "the time being. Please set 'Phreeqc'' as the chemical solver for "
664 "reactive transport modeling.");
666 else if (boost::iequals(chemical_solver,
"SelfContained"))
669 "Use self-contained chemical solver for water chemistry "
679 "Unknown chemical solver. Please specify either Phreeqc or "
680 "PhreeqcKernel as the solver for water chemistry calculation "
684 (void)output_directory;
687 "Found the type of the process to be solved is not component transport "
688 "process. Please specify the process type to ComponentTransport. At "
689 "the present, water chemistry calculation is only available for "
690 "component transport process.");
692 return chemical_solver_interface;
697 std::string
const& project_directory,
698 std::string
const& output_directory,
699 [[maybe_unused]] std::unique_ptr<ChemistryLib::ChemicalSolverInterface>&&
700 chemical_solver_interface)
702 (void)project_directory;
703 (void)output_directory;
705 DBUG(
"Reading processes:");
711 process_config.peekConfigParameter<std::string>(
"type");
715 process_config.getConfigParameter<std::string>(
"name");
717 [[maybe_unused]]
auto const integration_order =
719 process_config.getConfigParameter<
int>(
"integration_order");
721 std::unique_ptr<ProcessLib::Process> process;
725 process_config.getConfigSubtreeOptional(
"jacobian_assembler"));
727#ifdef OGS_BUILD_PROCESS_STEADYSTATEDIFFUSION
728 if (type ==
"STEADY_STATE_DIFFUSION")
737 name, *
_mesh_vec[0], std::move(jacobian_assembler),
743#ifdef OGS_BUILD_PROCESS_LIQUIDFLOW
744 if (type ==
"LIQUID_FLOW")
747 name, *
_mesh_vec[0], std::move(jacobian_assembler),
753#ifdef OGS_BUILD_PROCESS_STOKESFLOW
754 if (type ==
"StokesFlow")
761 name, *
_mesh_vec[0], std::move(jacobian_assembler),
767 "StokesFlow process does not support given "
774#ifdef OGS_BUILD_PROCESS_TES
778 name, *
_mesh_vec[0], std::move(jacobian_assembler),
784#ifdef OGS_BUILD_PROCESS_TH2M
791 name, *
_mesh_vec[0], std::move(jacobian_assembler),
798 name, *
_mesh_vec[0], std::move(jacobian_assembler),
804 OGS_FATAL(
"TH2M process does not support given dimension");
809#ifdef OGS_BUILD_PROCESS_HEATCONDUCTION
810 if (type ==
"HEAT_CONDUCTION")
813 name, *
_mesh_vec[0], std::move(jacobian_assembler),
819#ifdef OGS_BUILD_PROCESS_HEATTRANSPORTBHE
820 if (type ==
"HEAT_TRANSPORT_BHE")
825 "HEAT_TRANSPORT_BHE can only work with a 3-dimensional "
831 name, *
_mesh_vec[0], std::move(jacobian_assembler),
837#ifdef OGS_BUILD_PROCESS_HYDROMECHANICS
838 if (type ==
"HYDRO_MECHANICS")
841 process_config.getConfigParameterOptional<
int>(
"dimension"))
844 "The 'dimension' tag has been removed in the merge-request "
846 "The dimension is now taken from the main mesh and the tag "
848 "removed. There is a python script in the merge-request "
850 "for automatic conversion.");
858 std::move(jacobian_assembler),
867 std::move(jacobian_assembler),
874 "HYDRO_MECHANICS process does not support given "
880#ifdef OGS_BUILD_PROCESS_LARGEDEFORMATION
881 if (type ==
"LARGE_DEFORMATION")
888 name, *
_mesh_vec[0], std::move(jacobian_assembler),
896 name, *
_mesh_vec[0], std::move(jacobian_assembler),
903 "LARGE_DEFORMATION process does not support given "
909#ifdef OGS_BUILD_PROCESS_LIE
910 if (type ==
"HYDRO_MECHANICS_WITH_LIE")
913 process_config.getConfigParameterOptional<
int>(
"dimension"))
916 "The 'dimension' tag has been removed in the merge-request "
918 "The dimension is now taken from the main mesh and the tag "
920 "removed. There is a python script in the merge-request "
922 "for automatic conversion.");
929 name, *
_mesh_vec[0], std::move(jacobian_assembler),
937 name, *
_mesh_vec[0], std::move(jacobian_assembler),
944 "HYDRO_MECHANICS_WITH_LIE process does not support "
950#ifdef OGS_BUILD_PROCESS_HT
954 name, *
_mesh_vec[0], std::move(jacobian_assembler),
960#ifdef OGS_BUILD_PROCESS_COMPONENTTRANSPORT
961 if (type ==
"ComponentTransport")
965 name, *
_mesh_vec[0], std::move(jacobian_assembler),
968 std::move(chemical_solver_interface));
972#ifdef OGS_BUILD_PROCESS_PHASEFIELD
973 if (type ==
"PHASE_FIELD")
980 name, *
_mesh_vec[0], std::move(jacobian_assembler),
988 name, *
_mesh_vec[0], std::move(jacobian_assembler),
997#ifdef OGS_BUILD_PROCESS_RICHARDSCOMPONENTTRANSPORT
998 if (type ==
"RichardsComponentTransport")
1002 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1008#ifdef OGS_BUILD_PROCESS_SMALLDEFORMATION
1009 if (type ==
"SMALL_DEFORMATION")
1016 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1024 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1031 "SMALL_DEFORMATION process does not support given "
1037#ifdef OGS_BUILD_PROCESS_SMALLDEFORMATIONNONLOCAL
1038 if (type ==
"SMALL_DEFORMATION_NONLOCAL")
1045 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1053 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1060 "SMALL_DEFORMATION_NONLOCAL process does not support "
1061 "given dimension {:d}",
1067#ifdef OGS_BUILD_PROCESS_LIE
1068 if (type ==
"SMALL_DEFORMATION_WITH_LIE")
1071 process_config.getConfigParameterOptional<
int>(
"dimension"))
1074 "The 'dimension' tag has been removed in the merge-request "
1076 "The dimension is now taken from the main mesh and the tag "
1078 "removed. There is a python script in the merge-request "
1080 "for automatic conversion.");
1087 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1095 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1102 "SMALL_DEFORMATION_WITH_LIE process does not support "
1108#ifdef OGS_BUILD_PROCESS_THERMOHYDROMECHANICS
1109 if (type ==
"THERMO_HYDRO_MECHANICS")
1112 process_config.getConfigParameterOptional<
int>(
"dimension"))
1115 "The 'dimension' tag has been removed in the merge-request "
1117 "The dimension is now taken from the main mesh and the tag "
1119 "removed. There is a python script in the merge-request "
1121 "for automatic conversion.");
1128 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1136 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1143 "THERMO_HYDRO_MECHANICS process does not support given "
1149#ifdef OGS_BUILD_PROCESS_THERMOMECHANICALPHASEFIELD
1150 if (type ==
"THERMO_MECHANICAL_PHASE_FIELD")
1157 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1165 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1174#ifdef OGS_BUILD_PROCESS_THERMOMECHANICS
1175 if (type ==
"THERMO_MECHANICS")
1182 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1190 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1199#ifdef OGS_BUILD_PROCESS_RICHARDSFLOW
1200 if (type ==
"RICHARDS_FLOW")
1203 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1209#ifdef OGS_BUILD_PROCESS_RICHARDSMECHANICS
1210 if (type ==
"RICHARDS_MECHANICS")
1213 process_config.getConfigParameterOptional<
int>(
"dimension"))
1216 "The 'dimension' tag has been removed in the merge-request "
1218 "The dimension is now taken from the main mesh and the tag "
1220 "removed. There is a python script in the merge-request "
1222 "for automatic conversion.");
1229 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1237 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1246#ifdef OGS_BUILD_PROCESS_THERMORICHARDSFLOW
1247 if (type ==
"THERMO_RICHARDS_FLOW")
1251 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1257#ifdef OGS_BUILD_PROCESS_THERMORICHARDSMECHANICS
1258 if (type ==
"THERMO_RICHARDS_MECHANICS")
1265 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1273 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1283#ifdef OGS_BUILD_PROCESS_TWOPHASEFLOWWITHPP
1284 if (type ==
"TWOPHASE_FLOW_PP")
1288 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1294#ifdef OGS_BUILD_PROCESS_TWOPHASEFLOWWITHPRHO
1295 if (type ==
"TWOPHASE_FLOW_PRHO")
1299 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1305#ifdef OGS_BUILD_PROCESS_THERMALTWOPHASEFLOWWITHPP
1306 if (type ==
"THERMAL_TWOPHASE_WITH_PP")
1310 name, *
_mesh_vec[0], std::move(jacobian_assembler),
1317 OGS_FATAL(
"Unknown process type: {:s}", type);
1321 [](std::unique_ptr<ProcessLib::Process>
const& p)
1322 {
return p->name; }))
1324 OGS_FATAL(
"The process name '{:s}' is not unique.", name);
1331 std::string
const& output_directory)
1333 DBUG(
"Reading time loop configuration.");
1335 bool const compensate_non_equilibrium_initial_residuum = std::any_of(
1338 [](
auto const& process_variable)
1339 {
return process_variable.compensateNonEquilibriumInitialResiduum(); });
1343 compensate_non_equilibrium_initial_residuum);
1347 OGS_FATAL(
"Initialization of time loop failed.");
1353 DBUG(
"Reading linear solver configuration.");
1359 auto const name = conf.getConfigParameter<std::string>(
"name");
1360 auto const linear_solver_parser =
1362 auto const solver_options =
1363 linear_solver_parser.parseNameAndOptions(
"", &conf);
1368 std::make_unique<GlobalLinearSolver>(std::get<0>(solver_options),
1369 std::get<1>(solver_options)),
1370 "The linear solver name is not unique");
1376 DBUG(
"Reading non-linear solver configuration.");
1381 auto const ls_name =
1383 conf.getConfigParameter<std::string>(
"linear_solver");
1386 "A linear solver with the given name does not exist.");
1389 auto const name = conf.getConfigParameter<std::string>(
"name");
1394 "The nonlinear solver name is not unique");
1405 DBUG(
"Reading curves configuration.");
1408 for (
auto conf : config->getConfigSubtreeList(
"curve"))
1411 auto const name = conf.getConfigParameter<std::string>(
"name");
1417 "The curve name is not unique.");
1425 [&mesh_name](
auto const& m)
1426 {
return m->getName() == mesh_name; },
1427 "Expected to find a mesh named " + mesh_name +
".")
Definition of the AsciiRasterInterface class.
Definition of the BoostXmlGmlInterface class.
Functionality to build different search length algorithm objects from given config.
Definition of the GEOObjects class.
std::vector< std::size_t > getNodes(GeoLib::Point const &pnt, std::vector< MeshLib::Node * > const &nodes, MeshLib::PropertyVector< int > const &mat_ids, std::pair< int, int > const &mat_limits, std::pair< double, double > const &elevation_limits, MeshLib::Mesh const &mesh)
void INFO(fmt::format_string< Args... > fmt, Args &&... args)
void DBUG(fmt::format_string< Args... > fmt, Args &&... args)
void ERR(fmt::format_string< Args... > fmt, Args &&... args)
void WARN(fmt::format_string< Args... > fmt, Args &&... args)
Definition of the Mesh class.
Definition of the GeoLib::Raster class.
Base class for different search length strategies.
std::optional< ConfigTree > getConfigSubtreeOptional(std::string const &root) const
std::optional< T > getConfigParameterOptional(std::string const ¶m) const
T getConfigParameter(std::string const ¶m) const
Range< SubtreeIterator > getConfigSubtreeList(std::string const &root) const
ConfigTree getConfigSubtree(std::string const &root) const
std::optional< T > getConfigAttributeOptional(std::string const &attr) const
Container class for geometric objects.
bool readFile(const std::string &fname) override
Reads an xml-file containing OGS geometry.
static PROCESSLIB_EXPORT const std::string constant_one_parameter_name
std::map< std::string, std::unique_ptr< GlobalLinearSolver > > _linear_solvers
std::optional< ParameterLib::CoordinateSystem > _local_coordinate_system
std::map< std::string, std::unique_ptr< NumLib::NonlinearSolverBase > > _nonlinear_solvers
void parseProcesses(BaseLib::ConfigTree const &processes_config, std::string const &project_directory, std::string const &output_directory, std::unique_ptr< ChemistryLib::ChemicalSolverInterface > &&chemical_solver_interface)
std::unique_ptr< ChemistryLib::ChemicalSolverInterface > parseChemicalSolverInterface(std::optional< BaseLib::ConfigTree > const &config, const std::string &output_directory)
void parseMedia(std::optional< BaseLib::ConfigTree > const &media_config)
Parses media configuration and saves them in an object.
void parseLinearSolvers(BaseLib::ConfigTree const &config)
std::vector< std::unique_ptr< ParameterLib::ParameterBase > > _parameters
Buffer for each parameter config passed to the process.
std::vector< std::unique_ptr< ProcessLib::Process > > _processes
MeshLib::Mesh * getMesh(std::string const &mesh_name) const
std::vector< GeoLib::NamedRaster > _named_rasters
void parseNonlinearSolvers(BaseLib::ConfigTree const &config)
std::vector< ProcessLib::ProcessVariable > _process_variables
void parseProcessVariables(BaseLib::ConfigTree const &process_variables_config)
std::map< std::string, std::unique_ptr< MathLib::PiecewiseLinearInterpolation > > _curves
void parseCurves(std::optional< BaseLib::ConfigTree > const &config)
std::vector< std::unique_ptr< MeshLib::Mesh > > _mesh_vec
void parseTimeLoop(BaseLib::ConfigTree const &config, const std::string &output_directory)
Parses the time loop configuration.
std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > _media
std::vector< std::string > parseParameters(BaseLib::ConfigTree const ¶meters_config)
std::unique_ptr< ProcessLib::TimeLoop > _time_loop
The time loop used to solve this project's processes.
std::pair< std::unique_ptr< NonlinearSolverBase >, NonlinearSolverTag > createNonlinearSolver(GlobalLinearSolver &linear_solver, BaseLib::ConfigTree const &config)
pybind11::scoped_interpreter setupEmbeddedPython()
Map::mapped_type & getOrError(Map &map, Key const &key, std::string const &error_message)
std::iterator_traits< InputIt >::reference findElementOrError(InputIt begin, InputIt end, Predicate predicate, std::string const &error="")
std::vector< int > splitMaterialIdString(std::string const &material_id_string)
void insertIfKeyUniqueElseError(Map &map, Key const &key, Value &&value, std::string const &error_message)
std::string copyPathToFileName(const std::string &file_name, const std::string &source)
std::unique_ptr< ChemicalSolverInterface > createChemicalSolverInterface(std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::map< std::string, std::unique_ptr< GlobalLinearSolver > > const &linear_solvers, BaseLib::ConfigTree const &config, std::string const &output_directory)
std::unique_ptr< Medium > createMedium(int const material_id, int const geometry_dimension, BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, ParameterLib::CoordinateSystem const *const local_coordinate_system, std::map< std::string, std::unique_ptr< MathLib::PiecewiseLinearInterpolation > > const &curves)
std::unique_ptr< CurveType > createPiecewiseLinearCurve(BaseLib::ConfigTree const &config)
MeshLib::Mesh * readMeshFromFile(const std::string &file_name)
constexpr ranges::views::view_closure names
For an element of a range view return its name.
void setMeshSpaceDimension(std::vector< std::unique_ptr< Mesh > > const &meshes)
std::unique_ptr< ParameterBase > createParameter(BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::vector< GeoLib::NamedRaster > const &named_rasters, std::map< std::string, std::unique_ptr< MathLib::PiecewiseLinearInterpolation > > const &curves)
std::unique_ptr< Process > createComponentTransportProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media, std::unique_ptr< ChemistryLib::ChemicalSolverInterface > &&chemical_solver_interface)
std::unique_ptr< Process > createHTProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createHeatConductionProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createHeatTransportBHEProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< std::string, std::unique_ptr< MathLib::PiecewiseLinearInterpolation > > const &curves, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createHydroMechanicsProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createHydroMechanicsProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
template std::unique_ptr< Process > createHydroMechanicsProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
std::unique_ptr< Process > createLiquidFlowProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createPhaseFieldProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
template std::unique_ptr< Process > createPhaseFieldProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
std::unique_ptr< Process > createRichardsComponentTransportProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createRichardsFlowProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createRichardsMechanicsProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createRichardsMechanicsProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createSteadyStateDiffusion(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::vector< std::unique_ptr< MeshLib::Mesh > > const &meshes, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createStokesFlowProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createTESProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config)
template std::unique_ptr< Process > createTH2MProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createTH2MProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createThermalTwoPhaseFlowWithPPProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoHydroMechanicsProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoHydroMechanicsProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoMechanicalPhaseFieldProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
template std::unique_ptr< Process > createThermoMechanicalPhaseFieldProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config)
template std::unique_ptr< Process > createThermoMechanicsProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoMechanicsProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createThermoRichardsFlowProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoRichardsMechanicsProcess< 3 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
template std::unique_ptr< Process > createThermoRichardsMechanicsProcess< 2 >(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, std::optional< ParameterLib::CoordinateSystem > const &local_coordinate_system, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createTwoPhaseFlowWithPPProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< Process > createTwoPhaseFlowWithPrhoProcess(std::string const &name, MeshLib::Mesh &mesh, std::unique_ptr< ProcessLib::AbstractJacobianAssembler > &&jacobian_assembler, std::vector< ProcessVariable > const &variables, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters, unsigned const integration_order, BaseLib::ConfigTree const &config, std::map< int, std::shared_ptr< MaterialPropertyLib::Medium > > const &media)
std::unique_ptr< TimeLoop > createTimeLoop(BaseLib::ConfigTree const &config, std::string const &output_directory, const std::vector< std::unique_ptr< Process > > &processes, const std::map< std::string, std::unique_ptr< NumLib::NonlinearSolverBase > > &nonlinear_solvers, std::vector< std::unique_ptr< MeshLib::Mesh > > &meshes, bool const compensate_non_equilibrium_initial_residuum)
Builds a TimeLoop from the given configuration.
std::unique_ptr< AbstractJacobianAssembler > createJacobianAssembler(std::optional< BaseLib::ConfigTree > const &config)
std::vector< std::unique_ptr< MeshLib::Mesh > > readMeshes(BaseLib::ConfigTree const &config, std::string const &directory)
std::optional< ParameterLib::CoordinateSystem > parseLocalCoordinateSystem(std::optional< BaseLib::ConfigTree > const &config, std::vector< std::unique_ptr< ParameterLib::ParameterBase > > const ¶meters)
std::vector< GeoLib::NamedRaster > readRasters(BaseLib::ConfigTree const &config, std::string const &raster_directory, GeoLib::MinMaxPoints const &min_max_points)
std::unique_ptr< MeshLib::Mesh > readSingleMesh(BaseLib::ConfigTree const &mesh_config_parameter, std::string const &directory)
void readGeometry(std::string const &fname, GeoLib::GEOObjects &geo_objects)
Definition of readMeshFromFile function.
Single, constant value parameter.
static PROCESSLIB_EXPORT const std::string zero_parameter_name