<OpenGeoSysProject>
  <meshes>
    <mesh>soil_column_q8_with_ic.vtu</mesh>
    <mesh>soil_column_bottom.vtu</mesh>
    <mesh>soil_column_top.vtu</mesh>
    <mesh>soil_column_left.vtu</mesh>
    <mesh>soil_column_right.vtu</mesh>
  </meshes>
  <processes>
    <process>
      <name>TM</name>
      <type>THERMO_MECHANICS</type>
      <integration_order>3</integration_order>
      <constitutive_relation>
        <type>LinearElasticIsotropic</type>
        <youngs_modulus>E</youngs_modulus>
        <poissons_ratio>nu</poissons_ratio>
      </constitutive_relation>
      <specific_body_force>0 -9.81</specific_body_force>
      <process_variables>
        <displacement>displacement</displacement>
        <temperature>temperature</temperature>
      </process_variables>
      <secondary_variables>
        <secondary_variable internal_name="sigma" output_name="sigma" />
        <secondary_variable internal_name="epsilon" output_name="epsilon" />
      </secondary_variables>
    </process>
  </processes>
  <time_loop>
    <processes>
      <process ref="TM">
        <nonlinear_solver>basic_newton</nonlinear_solver>
        <convergence_criterion>
          <type>DeltaX</type>
          <norm_type>NORM2</norm_type>
          <abstol>1e-12</abstol>
        </convergence_criterion>
        <time_discretization>
          <type>BackwardEuler</type>
        </time_discretization>
        <time_stepping>
          <type>FixedTimeStepping</type>
          <t_initial>1</t_initial>
          <t_end>2</t_end>
          <timesteps>
            <pair>
              <repeat>2</repeat>
              <delta_t>1</delta_t>
            </pair>
          </timesteps>
        </time_stepping>
      </process>
    </processes>
    <output>
      <type>VTK</type>
      <prefix>equilibrium_restart</prefix>
      <timesteps>
        <pair>
          <repeat>2</repeat>
          <each_steps>1</each_steps>
        </pair>
      </timesteps>
      <variables>
        <variable>displacement</variable>
        <variable>temperature</variable>
        <variable>sigma</variable>
        <variable>epsilon</variable>
      </variables>
      <suffix>ts{:timestep}_t_{:time}</suffix>
    </output>
  </time_loop>
  <media>
    <medium>
      <phases>
        <phase>
          <type>Solid</type>
          <properties>
            <property>
              <name>thermal_conductivity</name>
              <type>Constant</type>
              <value>1</value>
            </property>
            <property>
              <name>specific_heat_capacity</name>
              <type>Constant</type>
              <value>1</value>
            </property>
            <property>
              <name>thermal_expansivity</name>
              <type>Constant</type>
              <value>6e-6</value>
            </property>
            <property>
              <name>density</name>
              <type>Constant</type>
              <value>2200.0</value>
            </property>
          </properties>
        </phase>
      </phases>
    </medium>
  </media>
  <parameters>
    <parameter>
      <name>E</name>
      <type>Constant</type>
      <value>1e9</value>
    </parameter>
    <parameter>
      <name>nu</name>
      <type>Constant</type>
      <value>.0</value>
    </parameter>
    <parameter>
      <name>temperature_ic</name>
      <type>Constant</type>
      <value>0</value>
    </parameter>
    <parameter>
      <name>displacement0</name>
      <type>Constant</type>
      <values>0 0</values>
    </parameter>
    <parameter>
      <name>Dirichlet_left</name>
      <type>Constant</type>
      <value>0.</value>
    </parameter>
    <parameter>
      <name>Zero</name>
      <type>Constant</type>
      <value>0.</value>
    </parameter>
    <parameter>
      <name>maximum_top_pressure</name>
      <type>Constant</type>
      <value>-1e6</value>
    </parameter>
    <parameter>
      <name>top_load</name>
      <type>CurveScaled</type>
      <curve>top_load_ramp</curve>
      <parameter>maximum_top_pressure</parameter>
    </parameter>
    <parameter>
      <mesh>soil_column_right</mesh>
      <name>side_load</name>
      <type>Function</type>
      <expression>-0.8*2200.0*9.81*(100.0-y)</expression>
    </parameter>
  </parameters>
  <curves>
    <curve>
      <name>top_load_ramp</name>
      <coords>0.0 1.0 2.0</coords>
      <values>0.0 0.5 1.0</values>
    </curve>
  </curves>
  <process_variables>
    <process_variable>
      <name>displacement</name>
      <components>2</components>
      <order>2</order>
      <initial_condition>displacement0</initial_condition>
      <boundary_conditions>
        <boundary_condition>
          <mesh>soil_column_bottom</mesh>
          <type>Dirichlet</type>
          <component>1</component>
          <parameter>Zero</parameter>
        </boundary_condition>
        <boundary_condition>
          <mesh>soil_column_left</mesh>
          <type>Dirichlet</type>
          <component>0</component>
          <parameter>Zero</parameter>
        </boundary_condition>
        <boundary_condition>
          <mesh>soil_column_top</mesh>
          <type>Neumann</type>
          <component>1</component>
          <parameter>top_load</parameter>
        </boundary_condition>
        <boundary_condition>
          <mesh>soil_column_right</mesh>
          <type>Neumann</type>
          <component>0</component>
          <parameter>side_load</parameter>
        </boundary_condition>
      </boundary_conditions>
    </process_variable>
    <process_variable>
      <name>temperature</name>
      <components>1</components>
      <order>1</order>
      <initial_condition>temperature_ic</initial_condition>
      <boundary_conditions>
        <boundary_condition>
          <mesh>soil_column_left</mesh>
          <type>Dirichlet</type>
          <parameter>temperature_ic</parameter>
        </boundary_condition>
      </boundary_conditions>
    </process_variable>
  </process_variables>
  <nonlinear_solvers>
    <nonlinear_solver>
      <name>basic_newton</name>
      <type>Newton</type>
      <max_iter>10</max_iter>
      <linear_solver>general_linear_solver</linear_solver>
    </nonlinear_solver>
  </nonlinear_solvers>
  <linear_solvers>
    <linear_solver>
      <name>general_linear_solver</name>
      <lis>-i cg -p jacobi -tol 1e-16 -maxiter 10000</lis>
      <eigen>
        <solver_type>SparseLU</solver_type>
        <precon_type>DIAGONAL</precon_type>
      </eigen>
      <petsc>
        <prefix>sd</prefix>
        <parameters>-sd_ksp_type cg -sd_pc_type bjacobi -sd_ksp_rtol 1e-16 -sd_ksp_max_it 10000</parameters>
      </petsc>
    </linear_solver>
  </linear_solvers>
  <test_definition>
    <vtkdiff>
      <file>equilibrium_restart_ts_1_t_2.000000.vtu</file>
      <field>displacement</field>
      <absolute_tolerance>1e-15</absolute_tolerance>
      <relative_tolerance>0</relative_tolerance>
    </vtkdiff>
    <vtkdiff>
      <file>equilibrium_restart_ts_1_t_2.000000.vtu</file>
      <field>sigma</field>
      <absolute_tolerance>1e-7</absolute_tolerance>
      <relative_tolerance>0</relative_tolerance>
    </vtkdiff>
  </test_definition>
</OpenGeoSysProject>